BioSample_ID Sample_ID Status Title_x Organism_x Taxonomy_ID isolation_source_x geo_loc_name collection_date all_attributes host_x host_disease Title_y Organism_y isolation_source_y host_y Text_Representation Habitat_Path Habitat_Level1 Habitat_Level2 Habitat_Level3 Habitat_Level4 Habitat_Level5 GOLD_Path_ID Classification_Level Overall_Confidence Classification_Method Quality_Score Key_Terms Word_Count SAMN12789772 12789772 Success Pathogen: environmental/food/other sample from Escherichia coli Escherichia coli 562 Chicken meat Cambodia 2016 "{""strain"": ""C27A"", ""collected_by"": ""Institut Pasteur du Cambodge"", ""collection_date"": ""2016"", ""geo_loc_name"": ""Cambodia"", ""isolation_source"": ""Chicken meat"", ""lat_lon"": ""11.5564 N 104.9282 E""}" Pathogen: environmental/food/other sample from Escherichia coli Escherichia coli Chicken meat Chicken meat Pathogen: environmental/food/other sample from Escherichia coli Cambodia Escherichia coli 2016 Engineered -> Food production -> Meat products Engineered Food production Meat products 5469_L3 3.0 0.25 GOLD 5-level classifier Basic environmental; food; coli; pathogen; chicken 12.0 SAMN12789774 12789774 Success Pathogen: environmental/food/other sample from Escherichia coli Escherichia coli 562 Healthy human (stool) Cambodia 2015 "{""strain"": ""P225M"", ""collected_by"": ""Institut Pasteur du Cambodge"", ""collection_date"": ""2015"", ""geo_loc_name"": ""Cambodia"", ""isolation_source"": ""Healthy human (stool)"", ""lat_lon"": ""11.5564 N 104.9282 E""}" Pathogen: environmental/food/other sample from Escherichia coli Escherichia coli Healthy human (stool) Healthy human (stool) Pathogen: environmental/food/other sample from Escherichia coli Cambodia Escherichia coli 2015 Environmental Environmental 1.0 0.15 GOLD 5-level classifier Basic healthy; food; environmental; droppings; manure 13.0 SAMN12789773 12789773 Success Pathogen: environmental/food/other sample from Escherichia coli Escherichia coli 562 Pork Cambodia 2016 "{""strain"": ""P59A"", ""collected_by"": ""Institut Pasteur du Cambodge"", ""collection_date"": ""2016"", ""geo_loc_name"": ""Cambodia"", ""isolation_source"": ""Pork"", ""lat_lon"": ""11.5564 N 104.9282 E""}" Pathogen: environmental/food/other sample from Escherichia coli Escherichia coli Pork Pork Pathogen: environmental/food/other sample from Escherichia coli Cambodia Escherichia coli 2016 Environmental Environmental 1.0 0.15 GOLD 5-level classifier Basic pork; environmental; food; coli; pathogen 11.0 SAMN12838238 12838238 Success Pathogen: clinical or host-associated sample from Klebsiella pneumoniae Klebsiella pneumoniae 573 missing Taiwan 2018 "{""strain"": ""2018S06-082"", ""isolate"": ""not collected"", ""collected_by"": ""NHRI"", ""collection_date"": ""2018"", ""geo_loc_name"": ""Taiwan"", ""host"": ""Homo sapiens"", ""host_disease"": ""missing"", ""isolation_source"": ""missing"", ""lat_lon"": ""not collected""}" Homo sapiens missing Pathogen: clinical or host-associated sample from Klebsiella pneumoniae Klebsiella pneumoniae missing Homo sapiens Pathogen: clinical or host-associated sample from Klebsiella pneumoniae Homo sapiens Taiwan Klebsiella pneumoniae 2018 Host-associated -> Plants -> Sap Host-associated Plants Sap 8529_L3 3.0 0.3 GOLD 5-level classifier Fair sapiens; associated; klebsiella; clinical; pneumoniae 14.0 SAMN12838284 12838284 Success 194195 Escherichia coli 562 feces not applicable 2015 "{""strain"": ""194195"", ""collected_by"": ""Gastrointestinal Bacteria Reference Unit, Public Health England"", ""collection_date"": ""2015"", ""geo_loc_name"": ""not applicable"", ""host"": ""Homo sapiens"", ""host_disease"": ""Gastroenteritis"", ""isolation_source"": ""feces"", ""lat_lon"": ""not applicable""}" Homo sapiens Gastroenteritis SAMN12825295 12825295 Success Pathogen: clinical or host-associated sample from Acinetobacter baumannii strain CAM180-1 Acinetobacter baumannii 470 oral cavity Cambodia: Battambang 2016-01-13 "{""strain"": ""CAM180-1"", ""culture_collection"": ""KCTC:72439"", ""collected_by"": ""Yong-Hak Kim"", ""collection_date"": ""2016-01-13"", ""geo_loc_name"": ""Cambodia: Battambang"", ""host"": ""Homo sapiens"", ""host_disease"": ""early childhood caries"", ""isolation_source"": ""oral cavity"", ""lat_lon"": ""13.06 N 103.12 E"", ""host_age"": ""4""}" Homo sapiens early childhood caries Pathogen: clinical or host-associated sample from Acinetobacter baumannii strain CAM180-1 Acinetobacter baumannii oral cavity Homo sapiens oral cavity Pathogen: clinical or host-associated sample from Acinetobacter baumannii strain CAM180-1 Homo sapiens Cambodia: Battambang Acinetobacter baumannii 2016-01-13 Host-associated -> Birds -> Digestive system -> Oral/Buccal cavity -> Tongue Host-associated Birds Digestive system Oral/Buccal cavity Tongue 7494_L5 5.0 0.316 GOLD 5-level classifier Fair cam180; sapiens; cambodia; homo; host 19.0 SAMN12838236 12838236 Success Pathogen: clinical or host-associated sample from Klebsiella pneumoniae Klebsiella pneumoniae 573 missing Taiwan 2018 "{""strain"": ""2018S07-013"", ""isolate"": ""not collected"", ""collected_by"": ""NHRI"", ""collection_date"": ""2018"", ""geo_loc_name"": ""Taiwan"", ""host"": ""Homo sapiens"", ""host_disease"": ""missing"", ""isolation_source"": ""missing"", ""lat_lon"": ""not collected""}" Homo sapiens missing Pathogen: clinical or host-associated sample from Klebsiella pneumoniae Klebsiella pneumoniae missing Homo sapiens Pathogen: clinical or host-associated sample from Klebsiella pneumoniae Homo sapiens Taiwan Klebsiella pneumoniae 2018 Host-associated -> Plants -> Sap Host-associated Plants Sap 8529_L3 3.0 0.3 GOLD 5-level classifier Fair sapiens; associated; klebsiella; clinical; pneumoniae 14.0 SAMN12838240 12838240 Success Pathogen: clinical or host-associated sample from Klebsiella pneumoniae Klebsiella pneumoniae 573 missing Taiwan 2018 "{""strain"": ""2018C01-046"", ""isolate"": ""not collected"", ""collected_by"": ""NHRI"", ""collection_date"": ""2018"", ""geo_loc_name"": ""Taiwan"", ""host"": ""Homo sapiens"", ""host_disease"": ""missing"", ""isolation_source"": ""missing"", ""lat_lon"": ""not collected""}" Homo sapiens missing Pathogen: clinical or host-associated sample from Klebsiella pneumoniae Klebsiella pneumoniae missing Homo sapiens Pathogen: clinical or host-associated sample from Klebsiella pneumoniae Homo sapiens Taiwan Klebsiella pneumoniae 2018 Host-associated -> Plants -> Sap Host-associated Plants Sap 8529_L3 3.0 0.3 GOLD 5-level classifier Fair sapiens; associated; klebsiella; clinical; pneumoniae 14.0